Scientific Program

Day 1 :

Keynote Forum

Dr. Hiroshi Kobayashi

Chiba University

Keynote: Innovation of anti-cancer chemotherapy specific to acidic nests.

Time : 10:00-10:40

Biography:

Hiroshi Kobayashi received his Ph.D. in Biochemistry from University of Tokyo in 1974. After his postdoctoral training at Colorado University Medical Center, he started to study adaptation strategies of microorganisms to acidic environments at Chiba University in 1978. His research has been focused on mammalian cell functions under acidic conditions from 1996 at Graduate School of Pharmaceutical Sciences, Chiba University. His current challenge is to develop cancer chemotherapy specific to acidic nests. He retired in March 2012 and is now a professor emeritus at Chiba University. He works as an associate editor of International Immunopharmacology published by Elsevier B.V. from 2014.

Abstract:

Acidity in cancer nests has been investigated for over 80 years, but anti-cancer chemotherapy specific to acidic microenvironments has not been developed. Acidification of cancer nests is generally less than 2 pH units, and it has been argued that intracellular pH is not changed due to the cytosolic pH homeostasis. However, recent studies have revealed that cytosolic pH decreases with the acidification of extracellular environments, although the pH change in cytosolic space is less than that in the surroundings. For example, cytosolic pH values were reported to be 7.4 and 6.9 in media with a pH of 7.4 and 6.5, respectively. In another report, cytosolic pH values were 7.4 and 6.8 in media with a pH of 7.4 and 6.2, respectively. Many researchers had thought that such small pH changes do not affect cellular metabolisms, but the expression of many genes was found to increase under acidic conditions. These data suggest that some metabolic activities alter as the acidification of cancer nests, leading us to develop anti-cancer chemotherapy specific to acidic nests. Until now, four drugs have been found to have high efficacy to inhibit cancer progression under acidic conditions. These acidosis-dependent drugs have a great advantage to be less effective in normal tissues whose pH is slightly alkaline. On the basis of these findings, I would like to discuss the innovative chemotherapy specific to cancers progressing in acidified nests.

Keynote Forum

Antonio Gomez-Munoz

University of the Basque Country (UPV/EHU). Spain

Keynote: Control of cell proliferation and migration by ceramide kinase/C1P. Implication in pancreatic cancer cell dissemination

Time : 10:40 - 11:20

Biography:

Antonio Gómez-Muñoz received his Ph.D in Biochemistry from the University of the Basque Country, Bilbao (Spain) in 1988. He achieved postdoctoral training at the University of Alberta in Edmonton (Canada) from 1988 to 1994. He then accepted a Research position at the Spanish Research Council (CSIC) from 1995 to 1996. From 1997 to 1998, he worked as Research Associate at the University of British Columbia (Vancouver, Canada). Since then, he has been working at the University of the Basque Country in Bilbao (Spain), where he is currently Professor of Biochemistry and Molecular Biology. He belongs to the Editorial Advisory Board of various scientific journals. Since 2001, he is a member of the International Advisory Committee of the Charleston Ceramide Conference, and since 2005, he is permanent Co-chair of the European Sphingolipid Club. His research interest is on the regulation of lipid metabolism and signalling, and in recent years he focused on the targeting of sphingolipid metabolites and enzymes with the aim of developing new strategies for prevention of disease.

Abstract:

Pancreatic cancer is the fourth leading cause of cancer mortality with a 5-year survival rate of only 6%. This aggressive disease is characterized by invasiveness, rapid progression and profound resistance to treatment. Using an in vitro cell migration assay we have found that ceramide 1-phosphate (C1P) enhances human pancreatic cancer cell migration and invasion potently and that this effect is completely abolished by pertussis toxin (PTX), suggesting the participation of a Gi protein-coupled receptor in this process. Activation of the C1P receptor caused phosphorylation and activation of ERK1-2 and Akt, and inhibition of these kinases abolished C1P-stimulated cell migration/invasion. We have also observed that human pancreatic cancer PANC-1 and Mia PaCa-2 cells migrate spontaneously. Contrary to the effect of C1P, spontaneous cell migration was insensitive to treatment with PTX. Investigation into the mechanisms responsible for spontaneous migration of the pancreatic cancer cells revealed that ceramide kinase (CerK) is a key enzyme in the regulation of this process. In fact, inhibition of CerK activity with the selective inhibitor NVP-231, or treatment with specific CerK siRNA to silence the gene encoding this kinase, potently reduced migration of the pancreatic cancer cells. By contrast, overexpression of CerK stimulated cell migration, an action that was concomitant with prolonged phosphorylation of ERK1-2 and Akt, which are kinases involved in C1P-stimulated cell migration/invasion, in a PTX independent manner. It can be concluded that the axis CerK/C1P plays a critical role in pancreatic cancer cell migration/invasion, and that targeting CerK expression or activity may be a relevant factor for controlling pancreatic cancer cell dissemination.

Keynote Forum

William Beck

University of Illinois, USA

Keynote: Splicing factors as novel therapeutic targets in cancer

Time : 11:40 - 12:20

Biography:

William T. Beck, PhD, is University Distinguished Professor and former Head of the Department of Biopharmaceutical Sciences in the College of Pharmacy at the University of Illinois at Chicago. His research efforts have focused on understanding the molecular and genetic mechanisms of anticancer drug action and tumor cell resistance to anticancer drugs. His current research focuses on splicing factor genes and their involvement in cancer initiation, progression, and resistance to therapy, as well as their potential as novel therapeutic targets in ovarian, breast, and brain cancers.

Abstract:

Pre-mRNA splicing, mediated by splicing factors, is a normal biochemical phenomenon that accounts in large part for the
proteomic diversity in our cells, as there are ~25,000 genes but ~100,000 proteins. Splice isoforms are specific for: Tissue, disease,
population, individuals, and are related to drug response. Cancer-specific alternative splicing as well as aberrant expression
of splicing factors is seen in tumors compared to normal tissues, but the mechanistic basis for this differential expression
remains unclear. We found that increased splicing in ovarian and breast cancer cells is related to increased expression of
some splicing factors, including the heterogeneous nuclear ribonucleoprotein, polypyrimidine tract binding protein 1 (PTBP1)
and the serine-arginine rich protein, SRp20/SRSF3. Inhibition of expression of PTBP1 inhibits in vitro tumor cell growth,
colony formation, invasiveness (metastatic behavior), aerobic glycolysis (Warburg effect) and tumor growth in vivo; alters
expression of >1500 genes in many metabolic pathways and sensitizes cells to drugs. SRSF3 is up-regulated in breast tumor
tissues compared to normal breast tissue and correlated with tumor grade. In addition, knockdown of SRp20 resulted in cell
growth inhibition and apoptosis in a dose-dependent manner and was partially reversed by pretreating the cells with the pancaspase
inhibitor z-VAD-fmk, suggesting partial involvement of caspases in this apoptosis. Finally, we have identified by highthroughput
screening an FDA approved small molecule inhibitor of PTBP1 that inhibits cancer cell growth. Future studies will
be discussed.

  • Cancer Therapy and Novel Approaches
Speaker
Biography:

Abstract:

Statement of the Problem: Tongue Squamous Cell Carcinoma (TSCC) is one of the major health concerns worldwide with high
morbidity and mortality rates. Currently, effective therapeutic interventions for TSCC are limited. Therefore, identification of such
molecular targets is of clinical relevance. Recent data have shown that the ribosomal protein S6 kinase, 90 kDa, polypeptide 1 (RSK1),
a member of Ser/Thr protein kinases plays an important role in regulating cell invasion and metastasis in human cancers. How RSK1
play a role in TSCC remains currently unclear.
Aim: The purpose of this study was to examine a function of RSK1 in TSCC proliferation, migration and invasion of the TSCC cell
line HSC-3 and its lymph node metastatic counterpart HSC-3-M3 cell line using siRNA approach.
Findings: RSK1 expression was efficiently repressed using specific siRNAs compared to that of non-specific siRNA group. We found
that silencing RSK1 significantly inhibited cell proliferation in both HSC-3 and HSC-3-M3 cell lines. Live cell migration of HSC-3
and HSC-3-M3 transfected with RSK1 specific siRNA was compared with that of non-specific siRNA transfected cells using live cell
imaging. Inhibition of RSK1 expression in both HSC-3 and HSC-3-M3 also affected live cell migration. Importantly, silencing RSK1
interfered with invasive capacity of both HSC-3 and HSC-3-M3 cells lines. How RSK1 is involved in regulating TSCC invasiveness
will be discussed.
Conclusion & Significance: RSK1 may play a role in promoting cell proliferation, cell migration and invasion in TSCC cell lines.

  • Cancer Research
Speaker
Biography:

Experimental and Clinical Physiopathology Research Group CTS-1039, Department of Health Sciences, School of Health Sciences, University of Jaén, Campus Universitario Las Lagunillas, E23071 Jaén, Spain.

Abstract:

Plasma amino acid levels depend of all factors that affect the body’s amino acid flow and are tightly regulated through a continuous cycle of protein formation/degradation in order to maintain neutral protein balance. Different pathologies, including cancer, have frequently been associated with an alteration in protein metabolism and are characterized by an increase in protein exchange. In fact, the tumour cells require a greater amount of amino acids for the synthesis of new proteins and nucleic acids; therefore, changes in the circulating amino acid profile may be detected. Many studies have suggested the possibility of establishing a specific amino acid profile for each type of cancer. In addition, the influence of different compounds of diet has also been described in cancer. In the present work, we analyzed the influence of several normolipidic dietary fats (extra virgin olive oil, sunflower oil and sunflower oil enriched with oleic acid) on plasma amino acids in rats with N-methyl-nitrosourea (NMU)-induced breast cancer. It allowed us to know the changes in plasma amino acid levels in this animal model, if a specific profile of amino acid exits in this type of tumour and if dietary fat modified this profile. Our results showed significant increases in several amino acids, including aspartic acid, glutamine, glycine, 1-methyl-hystidine, 3-methyl-hystidine, ornithine, taurine and alanine in rats with NMU-induced breast cancer. Furthermore, pooled non-essential and basic amino acids were also increased in these animals. The analysis of dietary fats showed that plasma amino acid levels did not change in animals with NMU-induced breast cancer fed with extra virgin olive oil and sunflower oil, but those animals fed with oleic acid-enriched sunflower oil showed plasma amino acid levels similar to control group. These results may indicate that the establishment of a specific plasma amino acid profile for breast cancer could be influenced by external factors such as dietary fat.

L. Baram

Israel Institute of Technology

Title: Exploring The Anti-tumor Effects Of Medical Cannabis On Cancer Cells

Time : 13:50 - 14:20

Speaker
Biography:

Abstract:

Background
Cannabis plants contain more than 150 phytocannabinoids which are presumed to have bioactive properties. Yet, the identification of Cannabis components is usually limited to several species. Recently, the therapeutic potential of these phytocannabinoids has been rediscovered in cancer research as these compounds were found to have palliative effects in oncology. Moreover, there is accumulating evidence showing antitumor effects. In response to phytocannabinoids, several studies showed a regression of different tumors in vivo. Further investigations in vitro have revealed that they can induce cell death and inhibit proliferation of cancer cells. The concentrations and combinations of various phytocannabinoids determine both medicinal and adverse effects in patients. Therefore, analyzing the chemical content of differing Cannabis plants is of major importance.

The objective is to assess a variety of Cannabis preparations and to elucidate which factors are responsible for their antitumor effects, in order to better understand how Cannabis may effectively treat cancer

Methods
We perfected extraction techniques and identified distinct compositions of 12 clinically-used Cannabis strains. We then explored the differential antitumor effects of these Cannabis extracts (differing in cannabinoid compositions) on 12 cancer cell lines.

Conclusions
Categorizing cancer cells according to their response to medicinal Cannabis will provide valuable information for the development specific Cannabis treatments for subgroups of cancer patients.

 

Manfred Fischer

Institute of Radiology, Radiotherapy and Nuclear Medicine, Germany

Title: Radionuclide therapy of malignant bone lesions

Time : 14:20 - 14:50

Speaker
Biography:

Abstract:

Radionuclide therapy in patients suffering from bone metastases is used since decades. Primarily this treatment was approved for
bone pain palliation (89Strontium in bone lesions due to HRPC, 153Samarium for osteoblastic bone metastases, independently
from the primary tumor). In 2013, 223Radium was approved for treatment of HRPC bone metastases. A prolongation of median
survival in the verum group vs. placebo group of 3.6 months was observed. β-emitting radionuclides in combination with chemotherapy
may lead to a significant prolongation of median survival up to 10 months compared to patients only getting radionuclides, together
with also significant improvement of pain syndrome. More recently radiolabeled PSMA ligands are used in clinical trials and on a
compassionate use basis for diagnostic procedures in various primary, mainly prostate cancer tumors as well as in therapy of those
tumors expressing PSMA on the cell surface and showing sufficient tracer uptake. Studies with either 68Gallium-PSMA PET/CT
or 99mTc-PSMA for diagnostic procedures and 177Lutetium-PSMA ligands for treatment of HRPC bone and soft tissue lesions
are showing high sensitivity and for treatment excellent response rates given their predominant use as last line treatment. However,
prospective studies are needed to define the role of this approach in the management of advanced prostate carcinoma.

Speaker
Biography:

Abstract:

Blood smear analysis is the gold standard for routine diagnosis of hematological disorders and serves as recommendation for
further differential diagnosis such as flow cytometric immunophenotyping. Analysis and interpretation of peripheral blood
smears is time consuming and depends on interobserver variation. Most recently, label-free imaging based on Digital Holographic
Microscopy (DHM) emerged with the potential to perform label-free hematology analysis. Here, we present label-free leukemia
differentiation of clinical samples using a differential DHM in combination with three-dimensional hydrodynamic focusing of blood
cells. Based on principal component analysis and physical parameters we developed a gating strategy for the differentiation of 10
leukocyte subtypes which enabled the differentiation of Acute Myeloid Leukemia (AML), Acute Lymphocytic Leukemia (ALL),
Chronic Lymphocytic Leukemia (CLL) and Myelo Proliferative Neoplasms (MPN). Furthermore, we observed the possibility of MPN
subtyping and demonstrated in a one case study the progression of AML from first diagnosis to remission.

  • Young Researchers Forum

Session Introduction

Yuyan Wang

Peking Union Medical College, China

Title: Benefits and harms of low-dose CT screening in China: A decision analysis
Speaker
Biography:

Abstract:

During tumor progression, transformed cells accumulate mutations and gain malignancy. By now, it is unclear how easily this
process can be undertaken and if it can be considered the main bottleneck in tumorigenesis. To measure the probability of
glioma progression, we used a well-characterized murine model of gliomagenesis, induced by overexpressing PDGF-B in embryonic
Neural Progenitor Cells (NPC), mimicking a possible first hit of tumorigenesis. In order to univocally tag each PDGF-transduced cell,
we added a degenerated barcode sequence to the PDGF-B transducing vector and we produced high complexity libraries of barcoded
retroviruses that had been injected in mouse embryos. After the development of gliomas, tumor masses were analyzed by NGS and
compared to embryonic brains few days post infection. By using in-house developed software, we successfully retrieved barcodes
from tumor masses and reconstructed the clonal composition of several independent tumors in different progression stages. Our
data shows that even though low grade, partially progressed tumor masses are clonally heterogeneous and composed by about one
thousand independent clones each, they are the result of a strong selection because the number of oncogene-transduced cells is more
than 10 times higher. Still, high grade and fully progressed gliomas are characterized by a very low clonal complexity and often are
composed by a single clone, suggesting another great bottleneck in glioma progression divides these two stages. More strikingly, fully
progressed tumors derived from in vivo transplant the same pool of thousands different transduced NPCs are composed by the same
clones, suggesting that a predetermined cell state is required to gain malignancy.

Speaker
Biography:

Abstract:

High Grade Gliomas (HGG) are the main malignant tumors of central nervous system and, so far, almost incurable because of the
radio- and chemo-resistance. A novel therapeutic approach, based on recombinant oncolytic Herpes Simplex Viruses (oHSV)
that target cells expressing specific receptors, combined with immunomodulation, fits in the field of new promising strategies aimed
at enhancing a targeted and efficient therapeutic response. We evaluated the effects of a retargeted fully virulent HSV-1 (named
R-115) armed with mIL12 on established syngeneic hHER2 expressing HGG. R-115 exhibited a specific hHER2 tropism. When
locally injected in large established gliomas, it is effective in counteract tumor growth, doubling the median survival after treatment
and we observe for the first time the appearance of long survivors associated with the development of the resistance to recurrence of
the same neoplasia. Retargeted viruses are intrinsically safer than attenuated ones and unlike other studies, we obtained a substantial
percentage of long survivors after a single injection of viral preparation into fully established gliomas that could potentially improve
with earlier or repeated treatments. Moreover, we pointed out that mIL12 expressing R-115 enhanced the production of antibodies
targeting transplanted glioma cells and it makes the tumor tissue accessible to infiltration of T-lymphocytes. Results obtained represent
a step forward towards the possibility to treat HGGs with retargeted oHSV.

Day 2 :

Keynote Forum

Ujwala

CEO, Nucleon Therapeutics

Keynote: Keynote

Time : 09:30

Biography:

Abstract:

Not yet Submitted

Biography:

Shalini Gupta is the Associate Professor, Department of Oral Pathology & Microbiology, King Georges Medical University, Lucknow, India. She had University Merit Scholarship and got fourteen Gold Medals. She has involved with various research projects & reviewer in various journals. She has written two books and published around 50 papers in reputed journals and serving as an editorial member of many reputed journals

Abstract:

Oral cancer is one of the eight most common cancers in the world and occurs more often in males in developing countries than developed countries. Oral precancereous lesions, a benign morphologically altered tissue that has a greater than normal risk of malignant transformation, such as leukoplakia etc., is also very common. Leukoplakia and submucous fibrosis are early indicators of damage to the oral mucosa with a transformation rate of 2-12% to frank malignancies. Μany environmental factors and genetic factors are implicated in the development of oral cancer . Several factors related to angiogenesis, inflammation and thrombosis have also been associated with oral oncogenesis. Such factors previously implicated in cancer, inflammation and thrombotic events are tumor necrosis factor alpha (TNF-α) and beta (TNF-β), which are respectively encoded by TNF-α and TNF-β genes.
TNF-α-238G/A is a proinflammatory multifunctional cytokine produced by macrophages. It plays an important role in the regulation of immune response since its increase after traumatic injury generates a cytokine cascade resulting in activation, proliferation and hypertrophy of mononuclear and phagocytic cells. TNF-α-238G/A has been implicated in the pathogenesis and progression of various malignancies. The biological activities of TNF-α-238G/A and the fact that its gene is located within the major histocompatibility complex have suggested that polymorphisms in this locus may be associated with autoimmune, infectious and neoplastic disorders. In light of the recently found contribution of inflammation-related factors to oral cancer, the possible correlation of tumor necrosis factor alpha and beta genes (TNF-α and TNF-β) with risk of oral cancer was investigatedA study was done in King George Medical University, Luck now ,India in which a total 250 patients with Oral pre cancer & cancer and 250 healthy volunteers were genotypes for the TNF-α (-238) G/A andTNF-β(-252) A/G gene polymorphism. Genotypes were identified by polymerase chain reaction (PCR) restriction fragment length polymorphism(RFLP). Genotype frequencies were evaluated by Chi-square test and Odds ratio (OR) relative risk.
TNF-α (-238) G/A, TNF-β(-252) A/G polymorphism were significantly associated with Oral pre cancer & cancer patients as compared to healthy volunteers.(GA, p=0.0050*, AG, p= 0.497*)
We found that the TNF-α (-238) G/A, TNF-β(-252) A/G polymorphism were significantly associated with Oral pre cancer & cancer.

Biography:

Abstract:

Hospital Tumor Boards (TB) bring together multiple specialists in an effort to determine an optimal patient treatment
program. However, previous research on Tumor Boards suggests that multidisciplinary TBs do not necessarily
improve patient care, quality or survival. Drawing on insights from organizational theory and behavior, this research aimed
to understand why Tumor Boards often fail to live up to their potential. The study used ethnographic methods including
participant observation over three years of 44 Tumor Boards and 18 unstructured interviews at seven United States and
United Kingdom research hospitals. The study found that several factors related to endogenous and exogenous sources of
uncertainty in TBs contributed to sub-optimal treatment programs. Specifically, the study found that while the objective of
TB meetings was to reach optimal patient treatment decisions, the decision-making processes tended to be obstructed by (a)
hierarchical and nonhierarchical structures within the medical profession, (exogenous uncertainty) and (b) level of situational
complexity of patient cases (endogenous uncertainty). Together, these factors influenced and obstructed the “sensemaking” of
TB members. Future research should focus on better understanding how internal management policies derived from insights
from organizational theory can better facilitate the decision-making process in TB structures in highly complex patient cases.

  • Cancer Screening

Session Introduction

Hiroshi Kobayashi

Chiba University, Japan

Title: T cell functions under acidic conditions
Speaker
Biography:

Abstract:

It has been well known that solid cancer nests are acidified and immune cells infiltrate into such acidic cancer nests. However,
immune cell functions under acidic conditions have not been focused. Our group has investigated the TCR signaling under acidic
conditions with Jurkat T cells and human peripheral primary T cells. In Jurkat T cells, the phosphorylation of CD3 and ZAP-70 was
induced by the CD3 stimulation at pH 6.3 as well as pH 7.6. Calcium ions were mobilized by the CD3 stimulation at pH 7.6 and the
mobilization was strengthened by the co-stimulation with CD28. In contrast to alkaline pH, no calcium ion mobilization was induced
by the CD3 stimulation or co-stimulation of CD3 and CD28 at pH 6.3. Neither the stimulation of CD3 nor the co-stimulation of CD3
and CD28 induced the expression of interleukins at pH 6.3. The same results were obtained in human peripheral primary T cells.
These results suggest that the downstream pathway of the TCR-signaling does not work in T cells infiltrated into acidic cancer nests.
This may be a reason for attenuation of immune cell functions in cancer nests.

Speaker
Biography:

Abstract:

The purpose of hospital Tumor Boards (TBs) is for physicians to incorporate evidenced-based clinical guidelines and multidisciplinary
perspectives to find the best treatment program for patients; however, interdisciplinary collaboration can influence the decisionmaking
process and outcome. This qualitative ethnographic case study investigated team-based mechanisms to review the influence
of collaboration on cancer treatment decision-making. TB observation and interview data were gathered over three years (2013-
2016) at seven research hospitals in the United States and United Kingdom (44 Tumor Boards). Results showed an interdisciplinary
collaborative culture exists in some TBs influencing treatment decision-making processes and outcomes. Characteristics of these TBs
include: consistent and shared preferences and identity among members, consensual and coordinated group interactions, deliberate
guided practice and collective learning process, role and pattern recognition, shared power, interdependency and partnership. Future
research should focus on better understanding TB decision-making with comparisons between organizational structures.
Keywords: Tumor Board, interdisciplinary collaboration, decision-making, multidisciplinary, teamwork

Speaker
Biography:

Abstract:

Background: This study aimed to evaluate population outcomes with low-dose CT (LDCT) screening for lung cancer in urban areas of China.

 

Methods: A decision tree model with three scenarios (low-dose CT screening, chest X-ray screening, and no screening) was developed to compare screening results in a simulated Chinese urban cohort (100,000 smokers aged 45-80 years). Data of participant characteristics were obtained from national registries and epidemiological surveys for estimating lung cancer prevalence. The selection of other tree variables such as sensitivities and specificities of LDCT and chest X-ray screening were based on literature research (mainly in China). Base case and sensitivity analyses were performed to compare mortality, false positive findings, and quality-adjusted life years (QALY) in the three scenarios.

Results: In base case analysis, there were 448, 541, and 591 lung cancer deaths in the low-dose CT, chest X-ray, and no screening scenarios, respectively (17.2% reduction in low-dose CT screening over chest X-ray screening and 24.2% over no screening). LDCT screening resulted in slightly more QALYs: 147 years over chest X-ray screening and 250 years over no screening. However, in sensitive analysis, improvement in mortality was subtle or negative with LDCT (16 absolute, 5.4% relative reduction compared with no screening, −11 absolute, −4.1% reduction compared with chest X-ray) in worst case, and the gain of QALY in low-dose CT screening over no screening would diminish if screening was performed among populations with a low prevalence of lung cancer below 436 per 100,000. Besides, the costs of LDCT screening were 9387 false diagnoses (3.76 times over chest X-ray) and 7 deaths due to false diagnosis (3.50 times over chest X-ray).

 

Conclusions: Our findings favor conducting LDCT screening in urban China in terms of mortality outcome. However, approaches to reducing false diagnoses and optimizing other screening conditions are highly needed to maximize benefits and minimize harms associated with this screening device.

Speaker
Biography:

Abstract:

To be updated

  • Young Researchers Forum

Session Introduction

Ceresa Davide

Genoa University, Italy

Title: Tracking glioma progression by genetic barcoding
Speaker
Biography:

Abstract:

During tumor progression, transformed cells accumulate mutations and gain malignancy. By now, it is unclear how easily this
process can be undertaken and if it can be considered the main bottleneck in tumorigenesis. To measure the probability of
glioma progression, we used a well-characterized murine model of gliomagenesis, induced by overexpressing PDGF-B in embryonic
Neural Progenitor Cells (NPC), mimicking a possible first hit of tumorigenesis. In order to univocally tag each PDGF-transduced cell,
we added a degenerated barcode sequence to the PDGF-B transducing vector and we produced high complexity libraries of barcoded
retroviruses that had been injected in mouse embryos. After the development of gliomas, tumor masses were analyzed by NGS and
compared to embryonic brains few days post infection. By using in-house developed software, we successfully retrieved barcodes
from tumor masses and reconstructed the clonal composition of several independent tumors in different progression stages. Our
data shows that even though low grade, partially progressed tumor masses are clonally heterogeneous and composed by about one
thousand independent clones each, they are the result of a strong selection because the number of oncogene-transduced cells is more
than 10 times higher. Still, high grade and fully progressed gliomas are characterized by a very low clonal complexity and often are
composed by a single clone, suggesting another great bottleneck in glioma progression divides these two stages. More strikingly, fully
progressed tumors derived from in vivo transplant the same pool of thousands different transduced NPCs are composed by the same
clones, suggesting that a predetermined cell state is required to gain malignancy.

Speaker
Biography:

Abstract:

Objectives: Oral Squamous Cell Carcinoma (OSCC) is a very invasive multistage process malignancy. It affects the stratified
squamous epithelial cells of the oral mucosa and associated with high death rates worldwide. E-cadherin protein is an important
marker of epithelial tissue and it is one of the key regulators of tissue integrity and polarity. The effect of E-cadherin protein down
regulation with tumour progression is well known to be associated with poor prognosis. However, the way that this protein affects cell
transcripts is still not well understood.
Methods: mouse Embryonic Stem Cells (mESCs) were used as a model for epithelial tissue alongside E-cadherin knockout mESCs
(Ecad-/-mESCs). Microarray analysis and methylation sequencing were done for both cell lines. The results were assessed using Venn
2.1.1 bioinformatic, Bismark v0.17, GRAETAnnotation web tool mouse UCSC mm10 genome browser. The shared data between
microarray and methylation sequencing were tested on OSCC tissue sections using immunofluorescence staining.
Results: The microarray has shown several thousand transcripts alterations which govern a number of biological processes.
Some of these transcripts were up-regulated while others were down-regulated. The E-cadherin inhibition has shown bias toward
hypermethylation of 10861annotated regions from Transcription Start Site (TSS) compared to hypomethylation (972 annotated
regions±TSS). About 1417 of hypermethylated regions were in CpG islands. Venn bioinformatics has identified 10% of data shared
between microarray down-regulated transcripts and hypermethylated genes. On the other hand, microarray up-regulated genes and
hypomethylated genes have shown 4% of shared data. The immunofluorescence evaluation of some shared genes on OSCC tissue
sections has shown significant effect of E-cadherin inhibition on their expression.
Conclusion: The inhibition of E-cadherin protein has a role on genes expression and methylation in mESC compared to Ecad-/-
mESC, with bias toward increase genes methylation. The study highlighted some genes that were regulated by E-cadherin inhibition
during oral squamous cell carcinoma formation.